Direct RNA sequencing reveals chicken post-transcriptional modifications in response to Campylobacter jejuni inoculation.

Autori: Zhao Y; Shandong Provincial Key laboratory for Livestock Germplasm Innovation & Utilization, College of Animal Science and Technology, Shandong Agricultural University, Tai'an, 271017, Shandong, China., Wang Y; Shandong Provincial Key laboratory for Livestock Germplasm Innovation & Utilization, College of Animal Science and Technology, Shandong Agricultural University, Tai'an, 271017, Shandong, China., Ren Y; Shandong Provincial Key laboratory for Livestock Germplasm Innovation & Utilization, College of Animal Science and Technology, Shandong Agricultural University, Tai'an, 271017, Shandong, China., Liu L; Shandong Provincial Key laboratory for Livestock Germplasm Innovation & Utilization, College of Animal Science and Technology, Shandong Agricultural University, Tai'an, 271017, Shandong, China., Wang T; Shandong Provincial Key laboratory for Livestock Germplasm Innovation & Utilization, College of Animal Science and Technology, Shandong Agricultural University, Tai'an, 271017, Shandong, China., Liu L; College of Life Sciences, Shandong Agricultural University, Tai'an, 271017, Shandong, China., Li X; Shandong Provincial Key laboratory for Livestock Germplasm Innovation & Utilization, College of Animal Science and Technology, Shandong Agricultural University, Tai'an, 271017, Shandong, China. xyli@sdau.edu.cn.; Key Laboratory of Efficient Utilization of Non-grain Feed Resources (Co- construction by Ministry and Province), Ministry of Agriculture and Rural Affairs, Tai'an, 271017, Shandong, China. xyli@sdau.edu.cn.

Izvor: BMC genomics [BMC Genomics] 2025 Apr 14; Vol. 26 (1), pp. 374. Date of Electronic Publication: 2025 Apr 14.

Vrsta izdanja: Journal Article

Informacije o žurnalu: Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164 (Electronic) Linking ISSN: 14712164 NLM ISO Abbreviation: BMC Genomics Subsets: MEDLINE

MeSH pojmovi: Chickens*/genetics , Chickens*/microbiology , Campylobacter jejuni*/physiology , Sequence Analysis, RNA* , RNA Processing, Post-Transcriptional* , Campylobacter Infections*/genetics , Campylobacter Infections*/veterinary , Campylobacter Infections*/microbiology, Animals ; Gene Expression Profiling ; Cecum/microbiology ; Cecum/metabolism ; Transcriptome ; Alternative Splicing

Unveiling transfer RNA modifications of oil palm and their dynamic changes during fruit ripening.

Autori: Deng D; State Key Laboratory of Marine Resource Utilization in South China Sea, Hainan University, Haikou, 570228, P. R. China.; School of Ecology and Environment, Hainan University, Haikou, P. R. China., Qin Y; State Key Laboratory of Marine Resource Utilization in South China Sea, Hainan University, Haikou, 570228, P. R. China., Lin X; State Key Laboratory of Marine Resource Utilization in South China Sea, Hainan University, Haikou, 570228, P. R. China.; School of Life and Health Sciences, Hainan University, Haikou, P. R. China., Chu M; State Key Laboratory of Marine Resource Utilization in South China Sea, Hainan University, Haikou, 570228, P. R. China.; School of Life and Health Sciences, Hainan University, Haikou, P. R. China., Lv D; Analysis and Testing Center, Chinese Academy of Tropical Agricultural Sciences, Haikou, P.R. China., Lin H; State Key Laboratory of Marine Resource Utilization in South China Sea, Hainan University, Haikou, 570228, P. R. China. linhuan@hainanu.edu.cn.

Izvor: BMC plant biology [BMC Plant Biol] 2025 Mar 29; Vol. 25 (1), pp. 398. Date of Electronic Publication: 2025 Mar 29.

Vrsta izdanja: Journal Article

Informacije o žurnalu: Publisher: BioMed Central Country of Publication: England NLM ID: 100967807 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2229 (Electronic) Linking ISSN: 14712229 NLM ISO Abbreviation: BMC Plant Biol Subsets: MEDLINE

MeSH pojmovi: Fruit*/growth & development , Fruit*/genetics , Fruit*/metabolism , Arecaceae*/genetics , Arecaceae*/growth & development , Arecaceae*/metabolism , RNA, Transfer*/metabolism , RNA, Transfer*/genetics , RNA, Plant*/metabolism , RNA, Plant*/genetics , RNA Processing, Post-Transcriptional*, Methylation ; Gene Expression Regulation, Plant

Post-transcriptional regulation in early cell fate commitment of germ layers.

Autori: Gomes-Júnior R; Stem Cells Basic Biology Laboratory, Instituto Carlos Chagas - FIOCRUZ-PR, Curitiba, 81.350-010, Brazil., Delai da Silva Horinouchi C; Stem Cells Basic Biology Laboratory, Instituto Carlos Chagas - FIOCRUZ-PR, Curitiba, 81.350-010, Brazil., Hansel-Fröse AFF; Stem Cells Basic Biology Laboratory, Instituto Carlos Chagas - FIOCRUZ-PR, Curitiba, 81.350-010, Brazil., Ribeiro AL; Stem Cells Basic Biology Laboratory, Instituto Carlos Chagas - FIOCRUZ-PR, Curitiba, 81.350-010, Brazil., Pereira IT; Stem Cells Basic Biology Laboratory, Instituto Carlos Chagas - FIOCRUZ-PR, Curitiba, 81.350-010, Brazil., Spangenberg L; Bioinformatics Unit, Institut Pasteur de Montevideo, Montevideo, CP, 11400, Uruguay.; Basic Medicine Department, Facultad de Medicina, Clinical Hospital, Universidad de La República Uruguay, Montevideo, CP, 11100, Uruguay., Dallagiovanna B; Stem Cells Basic Biology Laboratory, Instituto Carlos Chagas - FIOCRUZ-PR, Curitiba, 81.350-010, Brazil. bruno.dallagiovanna@fiocruz.br.

Izvor: BMC genomics [BMC Genomics] 2025 Mar 08; Vol. 26 (1), pp. 225. Date of Electronic Publication: 2025 Mar 08.

Vrsta izdanja: Journal Article

Informacije o žurnalu: Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164 (Electronic) Linking ISSN: 14712164 NLM ISO Abbreviation: BMC Genomics Subsets: MEDLINE

MeSH pojmovi: Cell Differentiation*/genetics , Germ Layers*/cytology , Germ Layers*/metabolism , Cell Lineage*/genetics , Gene Expression Regulation, Developmental* , RNA Processing, Post-Transcriptional*, Humans ; Human Embryonic Stem Cells/cytology ; Human Embryonic Stem Cells/metabolism ; Polyribosomes/metabolism ; Polyribosomes/genetics ; Gene Expression Profiling ; Transcriptome ; Sequence Analysis, RNA

Iron-mediated post-transcriptional regulation in Toxoplasma gondii.

Autori: Sloan MA; School of Infection and Immunity, University of Glasgow, Glasgow, United Kingdom., Scott A; School of Infection and Immunity, University of Glasgow, Glasgow, United Kingdom., Aghabi D; School of Infection and Immunity, University of Glasgow, Glasgow, United Kingdom., Mrvova L; School of Infection and Immunity, University of Glasgow, Glasgow, United Kingdom., Harding CR; School of Infection and Immunity, University of Glasgow, Glasgow, United Kingdom.

Izvor: PLoS pathogens [PLoS Pathog] 2025 Feb 03; Vol. 21 (2), pp. e1012857. Date of Electronic Publication: 2025 Feb 03 (Print Publication: 2025).

Vrsta izdanja: Journal Article

Informacije o žurnalu: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238921 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7374 (Electronic) Linking ISSN: 15537366 NLM ISO Abbreviation: PLoS Pathog Subsets: MEDLINE

MeSH pojmovi: Toxoplasma*/genetics , Toxoplasma*/metabolism , Iron*/metabolism , Gene Expression Regulation* , RNA Processing, Post-Transcriptional*, RNA Stability ; RNA, Messenger/genetics ; RNA, Messenger/metabolism ; Humans ; 3' Untranslated Regions ; Protozoan Proteins/genetics ; Protozoan Proteins/metabolism ; RNA, Protozoan/genetics ; RNA, Protozoan/metabolism ; Animals

Writers, readers, and erasers RNA modifications and drug resistance in cancer.

Autori: Chen D; Department of Neurosurgery, The First Affiliated Hospital of Zhengzhou University, Zhengzhou University, No. 1 Jianshe East Road, Erqi District, Zhengzhou, 450052, Henan, China., Gu X; Department of Oncology, The First Affiliated Hospital, College of Clinical Medicine, Henan University of Science and Technology, Luoyang, 471000, Henan, China., Nurzat Y; State Key Laboratory of Respiratory Disease, Department of Otolaryngology-Head and Neck Surgery, The First Affiliated Hospital, Guangzhou Medical University, Guangzhou, Guangdong, China., Xu L; Department of Infectious Diseases, The First Affiliated Hospital of Zhengzhou University, Zhengzhou University, No. 1 Jianshe East Road, Erqi District, Zhengzhou, 450052, Henan, China., Li X; Department of Neurosurgery, The First Affiliated Hospital of Zhengzhou University, Zhengzhou University, No. 1 Jianshe East Road, Erqi District, Zhengzhou, 450052, Henan, China., Wu L; Department of Neurosurgery, The First Affiliated Hospital of Zhengzhou University, Zhengzhou University, No. 1 Jianshe East Road, Erqi District, Zhengzhou, 450052, Henan, China., Jiao H; Department of Neurosurgery, The First Affiliated Hospital of Zhengzhou University, Zhengzhou University, No. 1 Jianshe East Road, Erqi District, Zhengzhou, 450052, Henan, China., Gao P; Department of Neurosurgery, The First Affiliated Hospital of Zhengzhou University, Zhengzhou University, No. 1 Jianshe East Road, Erqi District, Zhengzhou, 450052, Henan, China., Zhu X; Department of Neurosurgery, The First Affiliated Hospital of Zhengzhou University, Zhengzhou University, No. 1 Jianshe East Road, Erqi District, Zhengzhou, 450052, Henan, China. zhuxuqiang2007@163.com., Yan D; Department of Neurosurgery, The First Affiliated Hospital of Zhengzhou University, Zhengzhou University, No. 1 Jianshe East Road, Erqi District, Zhengzhou, 450052, Henan, China. mrdmyan@163.com., Li S; Department of Neurology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou University, No. 1 Jianshe East Road, Erqi District, Zhengzhou, 450052, Henan, China. 18039673197@163.com., Xue C; Department of Infectious Diseases, The First Affiliated Hospital of Zhengzhou University, Zhengzhou University, No. 1 Jianshe East Road, Erqi District, Zhengzhou, 450052, Henan, China. xchenzzu@163.com.

Izvor: Molecular cancer [Mol Cancer] 2024 Aug 30; Vol. 23 (1), pp. 178. Date of Electronic Publication: 2024 Aug 30.

Vrsta izdanja: Journal Article; Review

Informacije o žurnalu: Publisher: BioMed Central Country of Publication: England NLM ID: 101147698 Publication Model: Electronic Cited Medium: Internet ISSN: 1476-4598 (Electronic) Linking ISSN: 14764598 NLM ISO Abbreviation: Mol Cancer Subsets: MEDLINE

MeSH pojmovi: Drug Resistance, Neoplasm*/genetics , Neoplasms*/genetics , Neoplasms*/drug therapy , Neoplasms*/pathology , Neoplasms*/metabolism , RNA Processing, Post-Transcriptional*, Humans ; Animals ; Gene Expression Regulation, Neoplastic/drug effects ; Epigenesis, Genetic ; Antineoplastic Agents/pharmacology ; Antineoplastic Agents/therapeutic use ; RNA/genetics ; RNA/metabolism

A role for a Trypanosoma brucei cytosine RNA methyltransferase homolog in ribosomal RNA processing.

Autori: Militello KT; Biology Department, State University of New York at Geneseo, Geneseo, NY, United States of America., Leigh J; Biology Department, State University of New York at Geneseo, Geneseo, NY, United States of America., Pusateri M; Department of Microbiology and Immunology, Jacobs School of Medicine and Biomedical Sciences, Buffalo, NY, United States of America., Read LK; Department of Microbiology and Immunology, Jacobs School of Medicine and Biomedical Sciences, Buffalo, NY, United States of America., Vogler D; Biology Department, State University of New York at Geneseo, Geneseo, NY, United States of America.

Izvor: PloS one [PLoS One] 2024 Apr 25; Vol. 19 (4), pp. e0298521. Date of Electronic Publication: 2024 Apr 25 (Print Publication: 2024).

Vrsta izdanja: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Informacije o žurnalu: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

MeSH pojmovi: Trypanosoma brucei brucei*/genetics , Trypanosoma brucei brucei*/enzymology , Trypanosoma brucei brucei*/metabolism , RNA, Ribosomal*/metabolism , RNA, Ribosomal*/genetics , RNA Processing, Post-Transcriptional*, Methyltransferases/metabolism ; Methyltransferases/genetics ; Protozoan Proteins/metabolism ; Protozoan Proteins/genetics ; RNA, Protozoan/metabolism ; RNA, Protozoan/genetics ; RNA Interference ; Methylation

Knockdown of ribosome RNA processing protein 15 suppresses migration of hepatocellular carcinoma through inhibiting PATZ1-associated LAMC2/FAK pathway.

Autori: Pan T; Zhejiang Provincial Key Laboratory for Accurate Diagnosis and Treatment of Chronic Liver Diseases, The First Affiliated Hospital of Wenzhou Medical University, 325035, Wenzhou, Zhejiang, China., Li J; Department of Liver and Gall Surgery, The Third Affiliated Hospital of Wenzhou Medical University, 325200, Wenzhou, Zhejiang, China., Zhang O; Key Laboratory of Laboratory Medicine, Ministry of Education, School of Laboratory Medicine and Life Sciences, Wenzhou Medical University, 325035, Wenzhou, Zhejiang, China., Zhu Y; Key Laboratory of Laboratory Medicine, Ministry of Education, School of Laboratory Medicine and Life Sciences, Wenzhou Medical University, 325035, Wenzhou, Zhejiang, China., Zhou H; Zhejiang Provincial Key Laboratory for Accurate Diagnosis and Treatment of Chronic Liver Diseases, The First Affiliated Hospital of Wenzhou Medical University, 325035, Wenzhou, Zhejiang, China., Ma M; Key Laboratory of Laboratory Medicine, Ministry of Education, School of Laboratory Medicine and Life Sciences, Wenzhou Medical University, 325035, Wenzhou, Zhejiang, China., Yu Y; Key Laboratory of Laboratory Medicine, Ministry of Education, School of Laboratory Medicine and Life Sciences, Wenzhou Medical University, 325035, Wenzhou, Zhejiang, China., Lyu J; Department of Infectious Diseases, Lishui People's Hospital, 323000, Lishui, Zhejiang, China., Chen Y; Zhejiang Provincial Key Laboratory for Accurate Diagnosis and Treatment of Chronic Liver Diseases, The First Affiliated Hospital of Wenzhou Medical University, 325035, Wenzhou, Zhejiang, China. cyp@wmu.edu.cn., Xu L; Key Laboratory of Laboratory Medicine, Ministry of Education, School of Laboratory Medicine and Life Sciences, Wenzhou Medical University, 325035, Wenzhou, Zhejiang, China. liangxu1023@gmail.com.

Izvor: BMC cancer [BMC Cancer] 2024 Mar 12; Vol. 24 (1), pp. 334. Date of Electronic Publication: 2024 Mar 12.

Vrsta izdanja: Journal Article

Informacije o žurnalu: Publisher: BioMed Central Country of Publication: England NLM ID: 100967800 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2407 (Electronic) Linking ISSN: 14712407 NLM ISO Abbreviation: BMC Cancer Subsets: MEDLINE

MeSH pojmovi: Carcinoma, Hepatocellular*/genetics , Carcinoma, Hepatocellular*/pathology , Liver Neoplasms*/genetics , Liver Neoplasms*/pathology , RNA Processing, Post-Transcriptional* , Ribosomal Proteins*/genetics , Ribosomal Proteins*/metabolism, Animals ; Mice ; Cell Line, Tumor ; Cell Movement/genetics ; Cell Proliferation ; Epithelial-Mesenchymal Transition/genetics ; Focal Adhesion Protein-Tyrosine Kinases/genetics ; Focal Adhesion Protein-Tyrosine Kinases/metabolism ; Gene Expression Regulation, Neoplastic ; NF-kappa B/metabolism ; Ribosomes/metabolism ; Ribosomes/pathology ; Transcription Factors/genetics

A computational modeling of pri-miRNA expression.

Autori: Zheng H; Department of Computer Science, University of Central Florida, Orlando, Florida, United States of America., Wang S; Department of Computer Science, University of Central Florida, Orlando, Florida, United States of America., Li X; Burnett School of Biomedical Science, College of Medicine, University of Central Florida, Orlando, Florida, United States of America., Hu H; Department of Computer Science, University of Central Florida, Orlando, Florida, United States of America.

Izvor: PloS one [PLoS One] 2024 Jan 02; Vol. 19 (1), pp. e0290768. Date of Electronic Publication: 2024 Jan 02 (Print Publication: 2024).

Vrsta izdanja: Journal Article

Informacije o žurnalu: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

MeSH pojmovi: RNA Processing, Post-Transcriptional* , MicroRNAs*/metabolism, Gene Expression Regulation ; RNA, Messenger/genetics ; RNA, Messenger/metabolism ; Computer Simulation

NS1-mediated DNMT1 degradation regulates human bocavirus 1 replication and RNA processing.

Autori: Qin S; Center for Emerging Infectious Diseases, Wuhan Institute of Virology, Center for Biosafety Mega-Science, Chinese Academy of Sciences, Wuhan, Hubei, China.; University of Chinese Academy of Sciences, Beijing, China., Chen H; Center for Emerging Infectious Diseases, Wuhan Institute of Virology, Center for Biosafety Mega-Science, Chinese Academy of Sciences, Wuhan, Hubei, China., Tian C; Center for Emerging Infectious Diseases, Wuhan Institute of Virology, Center for Biosafety Mega-Science, Chinese Academy of Sciences, Wuhan, Hubei, China., Chen Z; Center for Emerging Infectious Diseases, Wuhan Institute of Virology, Center for Biosafety Mega-Science, Chinese Academy of Sciences, Wuhan, Hubei, China., Zuo L; Center for Emerging Infectious Diseases, Wuhan Institute of Virology, Center for Biosafety Mega-Science, Chinese Academy of Sciences, Wuhan, Hubei, China.; University of Chinese Academy of Sciences, Beijing, China., Zhang X; Center for Emerging Infectious Diseases, Wuhan Institute of Virology, Center for Biosafety Mega-Science, Chinese Academy of Sciences, Wuhan, Hubei, China., Hao H; Center for Emerging Infectious Diseases, Wuhan Institute of Virology, Center for Biosafety Mega-Science, Chinese Academy of Sciences, Wuhan, Hubei, China.; Hubei JiangXia Laboratory, Wuhan, Hubei, China., Huang F; Hubei JiangXia Laboratory, Wuhan, Hubei, China., Liu H; Center for Emerging Infectious Diseases, Wuhan Institute of Virology, Center for Biosafety Mega-Science, Chinese Academy of Sciences, Wuhan, Hubei, China.; Hubei JiangXia Laboratory, Wuhan, Hubei, China., Sun X; Center for Emerging Infectious Diseases, Wuhan Institute of Virology, Center for Biosafety Mega-Science, Chinese Academy of Sciences, Wuhan, Hubei, China., Guan W; Center for Emerging Infectious Diseases, Wuhan Institute of Virology, Center for Biosafety Mega-Science, Chinese Academy of Sciences, Wuhan, Hubei, China.; Hubei JiangXia Laboratory, Wuhan, Hubei, China.

Izvor: PLoS pathogens [PLoS Pathog] 2024 Nov 14; Vol. 20 (11), pp. e1012682. Date of Electronic Publication: 2024 Nov 14 (Print Publication: 2024).

Vrsta izdanja: Journal Article

Informacije o žurnalu: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238921 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7374 (Electronic) Linking ISSN: 15537366 NLM ISO Abbreviation: PLoS Pathog Subsets: MEDLINE

MeSH pojmovi: Viral Nonstructural Proteins*/metabolism , Viral Nonstructural Proteins*/genetics , Virus Replication*/physiology , DNA (Cytosine-5-)-Methyltransferase 1*/metabolism , DNA (Cytosine-5-)-Methyltransferase 1*/genetics , Human bocavirus*/metabolism , Human bocavirus*/genetics , DNA (Cytosine-5-)-Methyltransferases*/metabolism , DNA (Cytosine-5-)-Methyltransferases*/genetics , DNA Methylation* , RNA, Viral*/metabolism , RNA, Viral*/genetics, Humans ; Parvoviridae Infections/metabolism ; Parvoviridae Infections/virology ; RNA Processing, Post-Transcriptional ; DNA, Viral/metabolism ; DNA, Viral/genetics

Comprehensive analysis of the relationship between RNA modification writers and immune microenvironment in head and neck squamous cell carcinoma.

Autori: Li W; The First Clinical College of China Medical University, Shenyang, China., Chen Y; Department of Ultrasound, Xiaoshan Traditional Chinese Medical Hospital, Hangzhou, China., Zhang Y; Department of Gynaecology, Shengjing Hospital of China Medical University, Shenyang, China., Wen W; Department of Laboratory Medicine, Liaoning Clinical Research Center for Laboratory Medicine, Shengjing Hospital of China Medical University, Shenyang, China., Lu Y; The First Clinical College of Jinzhou Medical University, Jinzhou, China. l0129yy@126.com.

Izvor: BMC immunology [BMC Immunol] 2024 Nov 12; Vol. 25 (1), pp. 76. Date of Electronic Publication: 2024 Nov 12.

Vrsta izdanja: Journal Article

Informacije o žurnalu: Publisher: BioMed Central Country of Publication: England NLM ID: 100966980 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2172 (Electronic) Linking ISSN: 14712172 NLM ISO Abbreviation: BMC Immunol Subsets: MEDLINE

MeSH pojmovi: Tumor Microenvironment*/immunology , Tumor Microenvironment*/genetics , Squamous Cell Carcinoma of Head and Neck*/immunology , Squamous Cell Carcinoma of Head and Neck*/genetics , Head and Neck Neoplasms*/immunology , Head and Neck Neoplasms*/genetics , Gene Expression Regulation, Neoplastic*, Humans ; RNA Processing, Post-Transcriptional ; Biomarkers, Tumor/genetics ; Transcriptome ; Databases, Genetic ; RNA/genetics ; RNA/metabolism

Post-transcriptional control drives Aurora kinase A expression in human cancers.

Autori: Cacioppo R; Department of Pharmacology, University of Cambridge, Cambridge, United Kingdom., Rad D; Department of Pharmacology, University of Cambridge, Cambridge, United Kingdom., Pagani G; Department of Biosciences, University of Milan, Milan, Italy., Gandellini P; Department of Biosciences, University of Milan, Milan, Italy., Lindon C; Department of Pharmacology, University of Cambridge, Cambridge, United Kingdom.

Izvor: PloS one [PLoS One] 2024 Nov 11; Vol. 19 (11), pp. e0310625. Date of Electronic Publication: 2024 Nov 11 (Print Publication: 2024).

Vrsta izdanja: Journal Article; Meta-Analysis

Informacije o žurnalu: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

MeSH pojmovi: Aurora Kinase A*/genetics , Aurora Kinase A*/metabolism , Neoplasms*/genetics , Gene Expression Regulation, Neoplastic* , MicroRNAs*/genetics , MicroRNAs*/metabolism, Humans ; RNA, Messenger/genetics ; RNA, Messenger/metabolism ; RNA Processing, Post-Transcriptional ; Polyadenylation

N ⁶ -Methyladenosine-mediated phase separation suppresses NOTCH1 expression and promotes mitochondrial fission in diabetic cardiac fibrosis.

Autori: Liu ZY; Department of Anesthesiology and Perioperative Medicine, The Second Affiliated Hospital of Anhui Medical University, Hefei, 230601, People's Republic of China., Lin LC; Department of Anesthesiology and Perioperative Medicine, The Second Affiliated Hospital of Anhui Medical University, Hefei, 230601, People's Republic of China., Liu ZY; Department of Anesthesiology and Perioperative Medicine, The Second Affiliated Hospital of Anhui Medical University, Hefei, 230601, People's Republic of China., Song K; Department of Cardiothoracic Surgery, The Second Affiliated Hospital of Anhui Medical University, Hefei, 230601, People's Republic of China., Tu B; Department of Cardiothoracic Surgery, The Second Affiliated Hospital of Anhui Medical University, Hefei, 230601, People's Republic of China., Sun H; Department of Cardiothoracic Surgery, The Second Affiliated Hospital of Anhui Medical University, Hefei, 230601, People's Republic of China., Zhou Y; Department of Cardiothoracic Surgery, The Second Affiliated Hospital of Anhui Medical University, Hefei, 230601, People's Republic of China., Mao S; Department of Anesthesiology and Perioperative Medicine, The Second Affiliated Hospital of Anhui Medical University, Hefei, 230601, People's Republic of China., Zhang Y; Department of Anesthesiology and Perioperative Medicine, The Second Affiliated Hospital of Anhui Medical University, Hefei, 230601, People's Republic of China., Li R; Department of Anesthesiology and Perioperative Medicine, The Second Affiliated Hospital of Anhui Medical University, Hefei, 230601, People's Republic of China. lrayd@sina.com., Yang JJ; Department of Clinical Pharmacology, The Second Affiliated Hospital of Anhui Medical University, Hefei, 230601, People's Republic of China. yangjingjing@ahmu.edu.cn., Zhao JY; Institute for Developmental and Regenerative Cardiovascular Medicine, MOE-Shanghai Key Laboratory of Children's Environmental Health, Xinhua Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, 200092, People's Republic of China. zhaojy@vip.163.com., Tao H; Department of Anesthesiology and Perioperative Medicine, The Second Affiliated Hospital of Anhui Medical University, Hefei, 230601, People's Republic of China. taohui@ahmu.edu.cn.; Department of Cardiothoracic Surgery, The Second Affiliated Hospital of Anhui Medical University, Hefei, 230601, People's Republic of China. taohui@ahmu.edu.cn.

Izvor: Cardiovascular diabetology [Cardiovasc Diabetol] 2024 Sep 28; Vol. 23 (1), pp. 347. Date of Electronic Publication: 2024 Sep 28.

Vrsta izdanja: Journal Article; Research Support, Non-U.S. Gov't

Informacije o žurnalu: Publisher: BioMed Central Country of Publication: England NLM ID: 101147637 Publication Model: Electronic Cited Medium: Internet ISSN: 1475-2840 (Electronic) Linking ISSN: 14752840 NLM ISO Abbreviation: Cardiovasc Diabetol Subsets: MEDLINE

MeSH pojmovi: Mitochondrial Dynamics* , Receptor, Notch1*/metabolism , Receptor, Notch1*/genetics , Fibrosis* , Diabetic Cardiomyopathies*/metabolism , Diabetic Cardiomyopathies*/genetics , Diabetic Cardiomyopathies*/pathology , Diabetic Cardiomyopathies*/etiology , Adenosine*/analogs & derivatives , Adenosine*/metabolism , Mice, Knockout* , RNA-Binding Proteins*/metabolism , RNA-Binding Proteins*/genetics , Signal Transduction* , AlkB Homolog 5, RNA Demethylase*/metabolism , AlkB Homolog 5, RNA Demethylase*/genetics, Animals ; Humans ; Male ; Cells, Cultured ; Mitochondria, Heart/metabolism ; Mitochondria, Heart/pathology ; Disease Models, Animal ; Mice, Inbred C57BL ; Fibroblasts/metabolism ; Fibroblasts/pathology ; Mice ; RNA Processing, Post-Transcriptional ; Myocytes, Cardiac/metabolism ; Myocytes, Cardiac/pathology ; Phase Separation ; Cell Adhesion Molecules ; Receptors, Leptin

RNA m6A modification in ferroptosis: implications for advancing tumor immunotherapy.

Autori: Shi JX; The Third Department of Hepatic Surgery, Eastern Hepatobiliary Surgery Hospital, Naval Medical University, Shanghai, 200438, China., Zhang ZC; The Third Department of Hepatic Surgery, Eastern Hepatobiliary Surgery Hospital, Naval Medical University, Shanghai, 200438, China., Yin HZ; The Department of Medical Genetics, Naval Medical University, Shanghai, 200433, China., Piao XJ; The Third Department of Hepatic Surgery, Eastern Hepatobiliary Surgery Hospital, Naval Medical University, Shanghai, 200438, China., Liu CH; The Third Department of Hepatic Surgery, Eastern Hepatobiliary Surgery Hospital, Naval Medical University, Shanghai, 200438, China., Liu QJ; The Third Department of Hepatic Surgery, Eastern Hepatobiliary Surgery Hospital, Naval Medical University, Shanghai, 200438, China., Zhang JC; The Third Department of Hepatic Surgery, Eastern Hepatobiliary Surgery Hospital, Naval Medical University, Shanghai, 200438, China., Zhou WX; The Third Department of Hepatic Surgery, Eastern Hepatobiliary Surgery Hospital, Naval Medical University, Shanghai, 200438, China., Liu FC; The Third Department of Hepatic Surgery, Eastern Hepatobiliary Surgery Hospital, Naval Medical University, Shanghai, 200438, China., Yang F; The Department of Medical Genetics, Naval Medical University, Shanghai, 200433, China. yangfusq1997@smmu.edu.cn.; Key Laboratory of Biosafety Defense, Ministry of Education, Shanghai, 200433, China. yangfusq1997@smmu.edu.cn.; Shanghai Key Laboratory of Medical Biodefense, Shanghai, 200433, China. yangfusq1997@smmu.edu.cn., Wang YF; The Third Department of Hepatic Surgery, Eastern Hepatobiliary Surgery Hospital, Naval Medical University, Shanghai, 200438, China. wangyuefan2015@163.com., Liu H; The Third Department of Hepatic Surgery, Eastern Hepatobiliary Surgery Hospital, Naval Medical University, Shanghai, 200438, China. liuhuigg@hotmail.com.

Izvor: Molecular cancer [Mol Cancer] 2024 Sep 28; Vol. 23 (1), pp. 213. Date of Electronic Publication: 2024 Sep 28.

Vrsta izdanja: Journal Article; Review

Informacije o žurnalu: Publisher: BioMed Central Country of Publication: England NLM ID: 101147698 Publication Model: Electronic Cited Medium: Internet ISSN: 1476-4598 (Electronic) Linking ISSN: 14764598 NLM ISO Abbreviation: Mol Cancer Subsets: MEDLINE

MeSH pojmovi: Ferroptosis*/genetics , Neoplasms*/therapy , Neoplasms*/immunology , Neoplasms*/genetics , Neoplasms*/pathology , Neoplasms*/metabolism , Immunotherapy*/methods, Humans ; Animals ; Adenosine/analogs & derivatives ; Adenosine/metabolism ; Gene Expression Regulation, Neoplastic ; RNA Processing, Post-Transcriptional ; RNA Methylation

The novel roles of RNA m6A modification in regulating the development, infection, and oxidative DNA damage repair of Phytophthora sojae.

Autori: Zhang F; Department of Plant Pathology, College of Plant Protection, China Agricultural University, Beijing, China., Zhang B; Department of Plant Pathology, College of Plant Protection, China Agricultural University, Beijing, China., Cui T; Department of Plant Pathology, College of Plant Protection, China Agricultural University, Beijing, China., Chen S; Department of Plant Pathology, College of Plant Protection, China Agricultural University, Beijing, China., Zhang C; Department of Plant Pathology, College of Plant Protection, China Agricultural University, Beijing, China., Wang Z; Department of Plant Pathology, College of Plant Protection, China Agricultural University, Beijing, China., Liu X; Department of Plant Pathology, College of Plant Protection, China Agricultural University, Beijing, China.; State Key Laboratory of Crop Stress Biology for Arid Areas, College of Plant Protection, Northwest A&F University, Yangling, China.

Izvor: PLoS pathogens [PLoS Pathog] 2024 Sep 23; Vol. 20 (9), pp. e1012553. Date of Electronic Publication: 2024 Sep 23 (Print Publication: 2024).

Vrsta izdanja: Journal Article

Informacije o žurnalu: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238921 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7374 (Electronic) Linking ISSN: 15537366 NLM ISO Abbreviation: PLoS Pathog Subsets: MEDLINE

MeSH pojmovi: Phytophthora*/genetics , Phytophthora*/pathogenicity , Adenosine*/analogs & derivatives , Adenosine*/metabolism , DNA Repair* , DNA Damage* , Plant Diseases*/microbiology, Oxidative Stress ; Virulence/genetics ; RNA Processing, Post-Transcriptional ; RNA Methylation

Mitochondrial transcriptome of Candida albicans in flagranti - direct RNA sequencing reveals a new layer of information.

Autori: Piątkowski J; Institute of Genetics and Biotechnology, Faculty of Biology, University of Warsaw, 02-106, Warsaw, Poland. j.piatkowski@uw.edu.pl., Koźluk K; Institute of Genetics and Biotechnology, Faculty of Biology, University of Warsaw, 02-106, Warsaw, Poland., Golik P; Institute of Genetics and Biotechnology, Faculty of Biology, University of Warsaw, 02-106, Warsaw, Poland.; Institute of Biochemistry and Biophysics, Polish Academy of Sciences, 02-106, Warsaw, Poland.

Izvor: BMC genomics [BMC Genomics] 2024 Sep 14; Vol. 25 (1), pp. 860. Date of Electronic Publication: 2024 Sep 14.

Vrsta izdanja: Journal Article

Informacije o žurnalu: Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164 (Electronic) Linking ISSN: 14712164 NLM ISO Abbreviation: BMC Genomics Subsets: MEDLINE

MeSH pojmovi: Candida albicans*/genetics , Mitochondria*/genetics , Mitochondria*/metabolism , Transcriptome* , Sequence Analysis, RNA*/methods, Fungal Proteins/genetics ; Fungal Proteins/metabolism ; RNA Processing, Post-Transcriptional ; Gene Expression Profiling/methods

RluA is the major mRNA pseudouridine synthase in Escherichia coli.

Autori: Schaening-Burgos C; Department of Biology, Massachusetts Institute of Technology; Cambridge, Massachusetts, United States of America.; Program in Computational and Systems Biology, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America., LeBlanc H; Department of Biology, Massachusetts Institute of Technology; Cambridge, Massachusetts, United States of America., Fagre C; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut, United States of America., Li GW; Department of Biology, Massachusetts Institute of Technology; Cambridge, Massachusetts, United States of America., Gilbert WV; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut, United States of America.

Izvor: PLoS genetics [PLoS Genet] 2024 Sep 06; Vol. 20 (9), pp. e1011100. Date of Electronic Publication: 2024 Sep 06 (Print Publication: 2024).

Vrsta izdanja: Journal Article

Informacije o žurnalu: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101239074 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7404 (Electronic) Linking ISSN: 15537390 NLM ISO Abbreviation: PLoS Genet Subsets: MEDLINE

MeSH pojmovi: Escherichia coli*/genetics , RNA, Messenger*/genetics , RNA, Messenger*/metabolism , Pseudouridine*/genetics , Pseudouridine*/metabolism , Escherichia coli Proteins*/genetics , Escherichia coli Proteins*/metabolism , Nucleic Acid Conformation*, RNA, Transfer/genetics ; RNA, Bacterial/genetics ; RNA, Bacterial/metabolism ; Intramolecular Transferases/genetics ; Intramolecular Transferases/metabolism ; RNA, Ribosomal, 23S/genetics ; RNA Processing, Post-Transcriptional ; Phosphorus-Oxygen Lyases/genetics ; Phosphorus-Oxygen Lyases/metabolism

Methylation modifications in tRNA and associated disorders: Current research and potential therapeutic targets.

Autori: Wu Z; Department of General Surgery, Xiangya Hospital, Central South University, Changsha, Hunan, China.; National Clinical Research Center for Geriatric Disorders, Xiangya Hospital, Central South University, Changsha, Hunan, China., Zhou R; Department of General Surgery, Xiangya Hospital, Central South University, Changsha, Hunan, China.; National Clinical Research Center for Geriatric Disorders, Xiangya Hospital, Central South University, Changsha, Hunan, China., Li B; Department of General Surgery, Xiangya Hospital, Central South University, Changsha, Hunan, China., Cao M; Department of General Surgery, Xiangya Hospital, Central South University, Changsha, Hunan, China., Wang W; Department of Breast Surgery, Xiangya Hospital, Central South University, Changsha, Hunan, China.; Clinical Research Center for Breast Cancer in Hunan Province, Changsha, Hunan, China., Li X; Department of General Surgery, Xiangya Hospital, Central South University, Changsha, Hunan, China.; National Clinical Research Center for Geriatric Disorders, Xiangya Hospital, Central South University, Changsha, Hunan, China.

Izvor: Cell proliferation [Cell Prolif] 2024 Sep; Vol. 57 (9), pp. e13692. Date of Electronic Publication: 2024 Jun 28.

Vrsta izdanja: Journal Article; Review

Informacije o žurnalu: Publisher: Published for the Cell Kinetics Society, the European Study Group for Cell Proliferation, and the International Cell Cycle Society by Blackwell Scientific Publications Country of Publication: England NLM ID: 9105195 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1365-2184 (Electronic) Linking ISSN: 09607722 NLM ISO Abbreviation: Cell Prolif Subsets: MEDLINE

MeSH pojmovi: RNA, Transfer*/genetics , RNA, Transfer*/metabolism, Humans ; Methylation ; Animals ; Neoplasms/genetics ; Neoplasms/drug therapy ; Neoplasms/therapy ; Neoplasms/metabolism ; RNA Processing, Post-Transcriptional/genetics

Comparative analyses suggest a link between mRNA splicing, stability, and RNA covalent modifications in flowering plants.

Autori: Palos K; Boyce Thompson Institute, Cornell University, 533 Tower Road, Ithaca, NY, 14853, USA., Nelson Dittrich AC; Boyce Thompson Institute, Cornell University, 533 Tower Road, Ithaca, NY, 14853, USA., Lyons EH; School of Plant Sciences, University of Arizona, Tucson, AZ, USA., Gregory BD; Department of Biology, University of Pennsylvania, Philadelphia, PA, USA., Nelson ADL; Boyce Thompson Institute, Cornell University, 533 Tower Road, Ithaca, NY, 14853, USA. an425@cornell.edu.

Izvor: BMC plant biology [BMC Plant Biol] 2024 Aug 12; Vol. 24 (1), pp. 768. Date of Electronic Publication: 2024 Aug 12.

Vrsta izdanja: Journal Article; Comparative Study

Informacije o žurnalu: Publisher: BioMed Central Country of Publication: England NLM ID: 100967807 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2229 (Electronic) Linking ISSN: 14712229 NLM ISO Abbreviation: BMC Plant Biol Subsets: MEDLINE

MeSH pojmovi: RNA Splicing* , Arabidopsis*/genetics , Arabidopsis*/metabolism, Sorghum/genetics ; RNA Stability/genetics ; RNA, Messenger/genetics ; RNA, Messenger/metabolism ; RNA, Plant/genetics ; Zea mays/genetics ; Setaria Plant/genetics ; Setaria Plant/metabolism ; Gene Expression Regulation, Plant ; Magnoliopsida/genetics ; RNA Processing, Post-Transcriptional

Effects of Naphtho[2,1- a ]pyrene Exposure on CYP1A1 Expression: An in Vivo and in Vitro Mechanistic Study Exploring the Role of ... Posttranscriptional Modification.

Autori: Shen J; Key Lab of Modern Toxicology of Ministry of Education, Center for Global Health, School of Public Health, Nanjing Medical University, Nanjing, Jiangsu, China., Wang L; Key Lab of Modern Toxicology of Ministry of Education, Center for Global Health, School of Public Health, Nanjing Medical University, Nanjing, Jiangsu, China., Zhang W; Key Lab of Modern Toxicology of Ministry of Education, Center for Global Health, School of Public Health, Nanjing Medical University, Nanjing, Jiangsu, China., Gong X; Key Lab of Modern Toxicology of Ministry of Education, Center for Global Health, School of Public Health, Nanjing Medical University, Nanjing, Jiangsu, China.; State Key Lab of Reproductive Medicine and Offspring Health, Institute of Toxicology, Nanjing Medical University, Nanjing, Jiangsu, China., Li S; Key Lab of Modern Toxicology of Ministry of Education, Center for Global Health, School of Public Health, Nanjing Medical University, Nanjing, Jiangsu, China., Zou X; Key Lab of Modern Toxicology of Ministry of Education, Center for Global Health, School of Public Health, Nanjing Medical University, Nanjing, Jiangsu, China., Chen C; Key Lab of Modern Toxicology of Ministry of Education, Center for Global Health, School of Public Health, Nanjing Medical University, Nanjing, Jiangsu, China., Xia R; Key Lab of Modern Toxicology of Ministry of Education, Center for Global Health, School of Public Health, Nanjing Medical University, Nanjing, Jiangsu, China., Zhang D; Key Lab of Modern Toxicology of Ministry of Education, Center for Global Health, School of Public Health, Nanjing Medical University, Nanjing, Jiangsu, China., Xu S; Key Lab of Modern Toxicology of Ministry of Education, Center for Global Health, School of Public Health, Nanjing Medical University, Nanjing, Jiangsu, China.; State Key Lab of Reproductive Medicine and Offspring Health, Institute of Toxicology, Nanjing Medical University, Nanjing, Jiangsu, China., Xu J; Key Lab of Modern Toxicology of Ministry of Education, Center for Global Health, School of Public Health, Nanjing Medical University, Nanjing, Jiangsu, China.; State Key Lab of Reproductive Medicine and Offspring Health, Institute of Toxicology, Nanjing Medical University, Nanjing, Jiangsu, China., Wang S; Key Lab of Modern Toxicology of Ministry of Education, Center for Global Health, School of Public Health, Nanjing Medical University, Nanjing, Jiangsu, China.; State Key Lab of Reproductive Medicine and Offspring Health, Institute of Toxicology, Nanjing Medical University, Nanjing, Jiangsu, China., Jiang Y; Key Lab of Modern Toxicology of Ministry of Education, Center for Global Health, School of Public Health, Nanjing Medical University, Nanjing, Jiangsu, China., Sun H; Institute of Environment and Health, Jiangsu Provincial Center for Disease Control and Prevention, Nanjing, Jiangsu, China., Wang C; Key Lab of Modern Toxicology of Ministry of Education, Center for Global Health, School of Public Health, Nanjing Medical University, Nanjing, Jiangsu, China.; State Key Lab of Reproductive Medicine and Offspring Health, Institute of Toxicology, Nanjing Medical University, Nanjing, Jiangsu, China., Wang SL; Key Lab of Modern Toxicology of Ministry of Education, Center for Global Health, School of Public Health, Nanjing Medical University, Nanjing, Jiangsu, China.; State Key Lab of Reproductive Medicine and Offspring Health, Institute of Toxicology, Nanjing Medical University, Nanjing, Jiangsu, China.

Izvor: Environmental health perspectives [Environ Health Perspect] 2024 Aug; Vol. 132 (8), pp. 87003. Date of Electronic Publication: 2024 Aug 12.

Vrsta izdanja: Journal Article

Informacije o žurnalu: Publisher: National Institute of Environmental Health Sciences Country of Publication: United States NLM ID: 0330411 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1552-9924 (Electronic) Linking ISSN: 00916765 NLM ISO Abbreviation: Environ Health Perspect Subsets: MEDLINE

MeSH pojmovi: Cytochrome P-450 CYP1A1*/metabolism , Cytochrome P-450 CYP1A1*/genetics , Receptors, Aryl Hydrocarbon*/metabolism , Receptors, Aryl Hydrocarbon*/genetics, Animals ; Mice ; Male ; Mice, Knockout ; Adenosine/analogs & derivatives ; Adenosine/metabolism ; Environmental Pollutants/toxicity ; RNA Processing, Post-Transcriptional/drug effects

Altered landscape of total RNA, tRNA and sncRNA modifications in the liver and spleen of mice infected by Toxoplasma gondii.

Autori: Zhang XX; College of Veterinary Medicine, Qingdao Agricultural University, Qingdao, PR China., Sun YZ; College of Veterinary Medicine, Qingdao Agricultural University, Qingdao, PR China., Wang W; College of Veterinary Medicine, Qingdao Agricultural University, Qingdao, PR China., Gao Y; College of Animal Science and Veterinary Medicine, Heilongjiang Bayi Agriculture University, Daqing, PR China., Wei XY; College of Animal Science and Veterinary Medicine, Heilongjiang Bayi Agriculture University, Daqing, PR China., Sun HC; Institute of Animal Husbandry and Veterinary Medicine, Zhejiang Academy of Agricultural Science, Hangzhou, PR China., Wang CR; College of Animal Science and Veterinary Medicine, Heilongjiang Bayi Agriculture University, Daqing, PR China., Ni HB; College of Veterinary Medicine, Qingdao Agricultural University, Qingdao, PR China., Yang X; Department of Medical Microbiology and Immunology, School of Basic Medicine, Dali University, Dali, PR China., Elsheikha HM; Faculty of Medicine and Health Sciences, School of Veterinary Medicine and Science, University of Nottingham, Sutton Bonington Campus, Loughborough, United Kingdom., Guo HP; State Key Laboratory for Animal Disease Control and Prevention, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences (CAAS), Harbin, China.

Izvor: PLoS neglected tropical diseases [PLoS Negl Trop Dis] 2024 Jun 21; Vol. 18 (6), pp. e0012281. Date of Electronic Publication: 2024 Jun 21 (Print Publication: 2024).

Vrsta izdanja: Journal Article

Informacije o žurnalu: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101291488 Publication Model: eCollection Cited Medium: Internet ISSN: 1935-2735 (Electronic) Linking ISSN: 19352727 NLM ISO Abbreviation: PLoS Negl Trop Dis Subsets: MEDLINE

MeSH pojmovi: Toxoplasma*/genetics , Liver*/parasitology , Spleen*/parasitology , Spleen*/metabolism , RNA, Transfer*/genetics , RNA, Transfer*/metabolism, Animals ; Mice ; RNA Processing, Post-Transcriptional ; Female ; Host-Parasite Interactions ; RNA/genetics ; RNA/metabolism ; Toxoplasmosis, Animal/parasitology ; Toxoplasmosis/parasitology ; Mice, Inbred C57BL